Illumina HiSeq 2500 paired end sequencing of SAMD00049827 - SRA

DRX052546: Illumina HiSeq 2500 paired end sequencing of SAMD00049827
1 ILLUMINA (Illumina HiSeq 2500) run: 35.2M spots, 10.6G bases, 6.1Gb downloads

Submitted by: National Institute of Genetics (Japan) (NIG)

Study: Genome sequencing of wild rice Oryza punctata tetraploid accessions

PRJDB4701 • DRP005229 • All experiments • All runs

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Wild rice Oryza punctata plants contains diploids having BB genomes and allotetraploids having BBCC genomes. The evolutional origin of allotetraploids, especially the origin of CC genome, remains unclear. In order to obtain genome sequence information of the allotetraploids, we sequenced a total of eight O. punctata tetraploid accessions by Illumina HiSeq 2500.

Sample: W1023 genome

SAMD00049827 • DRS101401 • All experiments • All runs

Organism: Oryza aff. punctata 'tetraploid'

Library:

Instrument: Illumina HiSeq 2500

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: TruSeq DNA PCR-Free LS Sample Prep Kit, TruSeq Adapter, Index 15

Spot descriptor:

1 forward151 reverse

Runs: 1 run, 35.2M spots, 10.6G bases, 6.1Gb

Run	# of Spots	# of Bases	Size	Published
DRR057964	35,194,555	10.6G	6.1Gb	2019-07-04

ID:: 8484115

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Sequence Read Archive

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